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What were the top papers of 2012 on social media? : Nature News Blog
http://blogs.nature.com/news/2012/12/what-were-the-top-papers-of-2012-on-social-media.html encodenets within one of the top-10 lists
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correlated noise in TF co-association / FFLs
http://dx.doi.org/10.1016/j.bpj.2013.01.033 Cross Talk and Interference Enhance Information Capacity of a Signaling Pathway Sahand Hormoz QT:” A recurring motif in gene regulatory networks is...
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The Transcription Factor Titration Effect Dictates Level of Gene Expression
Interesting study looking at the effect of gene duplication on TF binding "…when a TF is shared among many binding sites, either due to multiple identical copies of a gene regulated by that TF or due...
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Inferring chromatin-bound protein complexes from genome-wide binding assays –...
Inferring [w. NMF] chromatin-bound protein complexes [of TFs] from [ENCODE ChIP-seq] binding assays, by @ElementoLab http://genome.cshlp.org/content/23/8/1295.full Giannopoulou E, Elemento O. 2013....
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uri alon’s coherent/incoherent ffls
Function of the FFL network motif http://www.PNAS.org/content/100/21/11980.abstract Decade-old work defining coherent & incoherent ones based on activation/repression...
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